CAT12 Utilities

Module contents

CAT12 segmentation interface utilities.

Submodules

django_mri.analysis.interfaces.matlab.spm.cat12.utils.batch_templates module

Definition of the CAT12_TEMPLATES constant, used to locate batch template file paths by interface key.

django_mri.analysis.interfaces.matlab.spm.cat12.utils.batch_templates.CAT12_TEMPLATES = {'CAT12 Segmentation': PosixPath('/home/docs/checkouts/readthedocs.org/user_builds/django-mri/checkouts/latest/django_mri/analysis/interfaces/matlab/spm/cat12/segmentation/batch_template.m')}

Batch template file path by interface (string) key.

django_mri.analysis.interfaces.matlab.spm.cat12.utils.template_files module

Relative paths to files required by some CAT12 analysis configurations.

django_mri.analysis.interfaces.matlab.spm.cat12.utils.template_files.RELATIVE_DARTEL_TEMPLATE_LOCATION = 'toolbox/cat12/templates_1.50mm/Template_1_IXI555_MNI152.nii'

Relative path to dartel template.

django_mri.analysis.interfaces.matlab.spm.cat12.utils.template_files.RELATIVE_TISSUE_PROBABILITY_MAP_LOCATION = 'tpm/TPM.nii'

Relative path to tissue probability map.